Index

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__init__() (gudhi.AlphaComplex method) (gudhi.CubicalComplex method) (gudhi.EuclideanStrongWitnessComplex method) (gudhi.EuclideanWitnessComplex method) (gudhi.PeriodicCubicalComplex method) (gudhi.RipsComplex method) (gudhi.SimplexTree method) (gudhi.StrongWitnessComplex method) (gudhi.TangentialComplex method) (gudhi.WitnessComplex method)

__min_birth_max_death() (in module gudhi)

A

AlphaComplex (class in gudhi)

assign_filtration() (gudhi.SimplexTree method)

B

betti_numbers() (gudhi.CubicalComplex method) (gudhi.PeriodicCubicalComplex method) (gudhi.SimplexTree method)

bottleneck_distance() (in module gudhi)

C

create_simplex_tree() (gudhi.AlphaComplex method) (gudhi.EuclideanStrongWitnessComplex method) (gudhi.EuclideanWitnessComplex method) (gudhi.RipsComplex method) (gudhi.StrongWitnessComplex method) (gudhi.TangentialComplex method) (gudhi.WitnessComplex method)

CubicalComplex (class in gudhi)

D

dimension() (gudhi.CubicalComplex method) (gudhi.PeriodicCubicalComplex method) (gudhi.SimplexTree method)

E

EuclideanStrongWitnessComplex (class in gudhi)

EuclideanWitnessComplex (class in gudhi) expansion() (gudhi.SimplexTree method)

F

filtration() (gudhi.SimplexTree method)

find() (gudhi.SimplexTree method) fix_inconsistencies_using_perturbation() (gudhi.TangentialComplex method)

G

get_cofaces() (gudhi.SimplexTree method) get_filtration() (gudhi.SimplexTree method) get_point() (gudhi.AlphaComplex method) (gudhi.EuclideanStrongWitnessComplex method) (gudhi.EuclideanWitnessComplex method) (gudhi.TangentialComplex method)

get_skeleton() (gudhi.SimplexTree method) get_star() (gudhi.SimplexTree method)

I

initialize_filtration() (gudhi.SimplexTree method)

insert() (gudhi.SimplexTree method)

M

make_filtration_non_decreasing() (gudhi.SimplexTree method)

N

num_inconsistent_simplices() (gudhi.TangentialComplex method) num_inconsistent_stars() (gudhi.TangentialComplex method) num_simplices() (gudhi.CubicalComplex method) (gudhi.PeriodicCubicalComplex method) (gudhi.SimplexTree method) (gudhi.TangentialComplex method)

num_vertices() (gudhi.SimplexTree method) (gudhi.TangentialComplex method)

P

PeriodicCubicalComplex (class in gudhi) persistence() (gudhi.CubicalComplex method) (gudhi.PeriodicCubicalComplex method) (gudhi.SimplexTree method) persistence_intervals_in_dimension() (gudhi.CubicalComplex method) (gudhi.PeriodicCubicalComplex method) (gudhi.SimplexTree method)

persistence_pairs() (gudhi.SimplexTree method) persistent_betti_numbers() (gudhi.CubicalComplex method) (gudhi.PeriodicCubicalComplex method) (gudhi.SimplexTree method) plot_persistence_barcode() (in module gudhi) plot_persistence_diagram() (in module gudhi) prune_above_filtration() (gudhi.SimplexTree method)

R

read_lower_triangular_matrix_from_csv_file() (in module gudhi) read_off() (in module gudhi) read_persistence_intervals_grouped_by_dimension() (in module gudhi)

read_persistence_intervals_in_dimension() (in module gudhi) remove_maximal_simplex() (gudhi.SimplexTree method) RipsComplex (class in gudhi)

S

set_dimension() (gudhi.SimplexTree method)

SimplexTree (class in gudhi) StrongWitnessComplex (class in gudhi)

T

TangentialComplex (class in gudhi)

U

upper_bound_dimension() (gudhi.SimplexTree method)

W

WitnessComplex (class in gudhi)

write_persistence_diagram() (gudhi.SimplexTree method)