Euclidean_witness_complex.h

/*    This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT.
 *    See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details.
 *    Author(s):       Siargey Kachanovich
 *
 *    Copyright (C) 2015 Inria
 *
 *    Modification(s):
 *      - 2019/08 Vincent Rouvreau: Fix issue #10 for CGAL and Eigen3
 *      - YYYY/MM Author: Description of the modification
 */
 
#ifndef EUCLIDEAN_WITNESS_COMPLEX_H_
#define EUCLIDEAN_WITNESS_COMPLEX_H_
 
#include <gudhi/Witness_complex.h>
#include <gudhi/Active_witness/Active_witness.h>
#include <gudhi/Kd_tree_search.h>
 
#include <CGAL/version.h>  // for CGAL_VERSION_NR
 
#include <Eigen/src/Core/util/Macros.h>  // for EIGEN_VERSION_AT_LEAST
 
#include <utility>
#include <vector>
#include <list>
#include <limits>
 
// Make compilation fail - required for external projects - https://github.com/GUDHI/gudhi-devel/issues/10
#if CGAL_VERSION_NR < 1041101000
# error Euclidean_witness_complex is only available for CGAL >= 4.11
#endif
 
#if !EIGEN_VERSION_AT_LEAST(3,1,0)
# error Euclidean_witness_complex is only available for Eigen3 >= 3.1.0 installed with CGAL
#endif
 
namespace Gudhi {
 
namespace witness_complex {
 
template< class Kernel_ >
class Euclidean_witness_complex
    : public Witness_complex<std::vector<typename Gudhi::spatial_searching::Kd_tree_search<Kernel_,
                                         std::vector<typename Kernel_::Point_d>>::INS_range>> {
 private:
  typedef Kernel_                                                                      K;
  typedef typename K::Point_d                                                          Point_d;
  typedef std::vector<Point_d>                                                         Point_range;
  typedef Gudhi::spatial_searching::Kd_tree_search<Kernel_, Point_range>               Kd_tree;
  typedef typename Kd_tree::INS_range                                                  Nearest_landmark_range;
  typedef typename std::vector<Nearest_landmark_range>                                 Nearest_landmark_table;
 
  typedef typename Nearest_landmark_range::Point_with_transformed_distance Id_distance_pair;
  typedef typename Id_distance_pair::first_type Landmark_id;
  typedef Landmark_id Vertex_handle;
 
 private:
  Point_range                         landmarks_;
  Kd_tree                             landmark_tree_;
  using Witness_complex<Nearest_landmark_table>::nearest_landmark_table_;
 
 public:
  /* @name Constructor
   */
 
 
  template< typename LandmarkRange,
            typename WitnessRange >
  Euclidean_witness_complex(const LandmarkRange & landmarks,
                            const WitnessRange &  witnesses)
    : landmarks_(std::begin(landmarks), std::end(landmarks)), landmark_tree_(landmarks) {
    nearest_landmark_table_.reserve(boost::size(witnesses));
    for (auto w : witnesses)
      nearest_landmark_table_.push_back(landmark_tree_.incremental_nearest_neighbors(w));
  }
 
  Point_d get_point(Vertex_handle vertex) const {
    return landmarks_[vertex];
  }
 
};
 
}  // namespace witness_complex
 
}  // namespace Gudhi
 
#endif  // EUCLIDEAN_WITNESS_COMPLEX_H_