:orphan: .. To get rid of WARNING: document isn't included in any toctree TensorFlow layer for lower-star persistence on simplex trees ############################################################ .. include:: differentiation_sum.inc Example of gradient computed from lower-star filtration of a simplex tree ------------------------------------------------------------------------- .. testcode:: from gudhi.tensorflow import LowerStarSimplexTreeLayer import tensorflow as tf import gudhi as gd st = gd.SimplexTree() st.insert([0, 1]) st.insert([1, 2]) st.insert([2, 3]) st.insert([3, 4]) st.insert([4, 5]) st.insert([5, 6]) st.insert([6, 7]) st.insert([7, 8]) st.insert([8, 9]) st.insert([9, 10]) F = tf.Variable([6.,4.,3.,4.,5.,4.,3.,2.,3.,4.,5.], dtype=tf.float32, trainable=True) sl = LowerStarSimplexTreeLayer(simplextree=st, homology_dimensions=[0]) with tf.GradientTape() as tape: dgm = sl.call(F)[0][0] loss = tf.math.reduce_sum(tf.square(.5*(dgm[:,1]-dgm[:,0]))) grads = tape.gradient(loss, [F]) print(grads[0].indices.numpy()) print(grads[0].values.numpy()) .. testoutput:: [2 4] [-1. 1.] Documentation for LowerStarSimplexTreeLayer ------------------------------------------- .. autoclass:: gudhi.tensorflow.LowerStarSimplexTreeLayer :members: :show-inheritance: